Eulerr Plot

Authors

[Editor] Hu Zheng;

[Contributors]

Setup

System Requirements: Cross-platform (Linux/MacOS/Windows)
Programming language: R
Dependent packages: eulerr; ggplotify

# Install packages
if (!requireNamespace("eulerr", quietly = TRUE)) {
  install.packages("eulerr")
}
if (!requireNamespace("ggplotify", quietly = TRUE)) {
  install.packages("ggplotify")
}

# Load packages
library(eulerr)
library(ggplotify)

Data Preparation

# Load data
data <- read.delim("files/Hiplot/051-eulerr-data.txt", header = T)

# convert data structure
genes <- as.numeric(data[, 2])
names(genes) <- as.character(data[, 1])
euler_set <- euler(genes)
  
# View data
head(data)

      Term Value
1       SE    13
2    Treat    28
3 Anti-CCP   101
4    DAS28    91
5 SE&Treat     1
6 SE&DAS28    14

Visualization

# Eulerr Plot
fill <- c("#3B4992FF","#EE0000FF","#008B45FF","#631879FF","#008280FF","#BB0021FF",
          "#5F559BFF","#A20056FF")
p <- as.ggplot(
  plot(euler_set,
    labels = list(col = rep("white", length(genes))),
    fills = list(fill = fill),
    quantities = list(type = c("percent", "counts"),
    col = rep("white", length(genes))),
    main = "Eulerr")
)

p